Can I "batch align" multiple meshes/ a faster way to align 2 meshes

[thiennhan0206]

Dear Daniel

My name is Nhan and Im working on my research project for my final year as a dental student.
Im planning to use CloudCompare as a tool to evaluate accuracy (trueness and precision) of 2 different scanners. Each scanner will make 30 scans. Therefore i will have:
Trueness (compared with reference data): 30 + 30 = 60 comparisons
Precision (comparing two scans from the same scanner) 30C2 + 30C2 = 870 comparisons.
As you can see, i will have to merge 930 times. So I was wondering if there are some features that can help me "batch merge" or "automate merging". If not, is there a way to do this myself?
an example of the mesh im working on

Screenshot 2026-06-30 144559.png (11.43 KiB) Viewed 104 times

I would appreciate any feedbacks and/or advice regarding this project.

[daniel]

If the clouds are already roughly registered, then you can probably try to automate things with the command line. You'll have the ability to do automatic registration (-ICP) and compute distances (C2M_DISTS, etc).

See https://www.cloudcompare.org/doc/wiki/i ... _line_mode

There's always a bit of tinkering, but there are plenty of messages on this forum, or you can ask more questions here.